When the king decides to take the dragons to Arkwood to visit Queen Rose, Rori, Drake, and their dragons are left behind--so when the evil wizard Maldred attacks the castle riding a giant four-headed dragon that spits poison, the two young dragon masters and their dragons are forced to defend the castle by themselves.

Drake has a dream about a new dragon that is somehow trapped in a cave, so Drake, Ana and their two dragons set off to find the Rainbow Dragon's dragon master, Obi. Together they must rescue the Rainbow Dragon, Dayo, from Kwaku, a giant spider who spins a deadly web.

Having taken the silver key, the evil wizard Maldred is after the gold key, which is protected by the Gold Dragon and her Dragon Master, Darma, but by the time Drake and Rori get there, Eko and her Thunder Dragon have seized the gold key--so together the three dragon masters, follow her through the portal to Maldred's tower, but without their dragons will they be able to stop Maldred and his deluded helper, or even save themselves?

Not all of the wizards who were freed from Maldred's time-trap were good wizards; one of them, Astrid, is planning on working a spell that will bring to life the bones that lie scattered in the Fortress of the Stone Dragon, bones that belonged to creatures much bigger than dragons--and when his friends are turned to stone it is up to Drake to find a way to save them, including his own dragon, Worm.

The wizard Astrid is planning to cast the False Life spell which will bring to life the bones of giant ancient beasts and allow her to conquer all the kingdoms; in order to prevent her the Dragon Masters must find the Wind Dragon, the final dragon needed to undo the spell--but that dragon and her Dragon Master are captives, and it is up to Drake and his friends to rescue them, and hope they are in time to stop Astrid.

Drake and the other Dragon Masters help Wildroot, a Flower Dragon whose home is in danger, find his Dragon Master Oskar after Oskar's identity is revealed to them by the Dragon Stone.

The Dragon Masters discover that a Shadow Dragon named Chaya and his Dragon Master Aruna are responsible for a huge shadow stretching across the sky, but how do they have so much power and why are other wizards around the world losing theirs?